Protein ZmC3H9
ZmC3H9 is a protein in the C3H family.
Information
TF Name: ZmC3H9
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H9
Uniprot ID: K7V7P1

Protein ZmC3H9

ZmC3H9 is a protein in the C3H family.

Overview of domains present in v5 transcripts
PF00642PF18044PF18345
Zm00001eb359300_T002
Zm00001eb359300_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011470DAPseq no logo sequence fimo position
Zm00001d011470DAPseq no logo sequence fimo position
Zm00001d011470ChIPseq no logo sequence fimo position
Zm00001d011470PChIPseq no logo sequence fimo position

Interactions where ZmC3H9 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H9 is the target  
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There are 120 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb359300_T002 from maize genome v5

Amino Acid Sequence
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MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00642
PF18345
PF18044
PF00642
PF18044
PF18345
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Nucleotide Sequence
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CCGATGTGTTTCTTCAATCCGCAGC...

GRMZM5G830949_T01 from maize genome v3


Related TFome: pUT4709

Amino Acid Sequence
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MQEALVSPANAGRLRFRSGLGAQAVRLRGPAPRLAALPQPQPQPRRRPMTRCSAARRRRSAPASASPPRRRRSPRPPSRS
RRPPPPPSPTTAATAPGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRR
LALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNR
KHRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVI
RHPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

Nucleotide Sequence
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CACACAGTCAGTCGATCGTCCTCTC...

Zm00001d011470_T001 from maize genome v4

Amino Acid Sequence
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MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

Nucleotide Sequence
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CACACAGTCAGTCGATCGTCCTCTC...

Zm00001eb359300_T001 from maize genome v5

Amino Acid Sequence
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MQEALVSPANAGRLRFRSALELKPFAFGDQRLASPRYLNLNLNLGGADDALFRCSSPTFSPSFGFSSSPSPLATSSVSLS
PTSSASLADDGCDGAGTDADADAATGHTLRLARLALQYQEVADRYELCLARLADAADDAAALRRENAELRNANADLTRRL
ALLSGIGKQVAAAAAAAEEARRLRFGEPKAVPAAKDCATEKPAVLPPKSISVRSIDFLLKMNQPKQVQPPATTPAASNRK
HRASNPTKPSSRVYKGNGGEKKDEELPKEQHAAGGVELEVFNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIR
HPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLACP

Nucleotide Sequence
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CACACAGTCAGTCGATCGTCCTCTC...


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